PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.42MZK
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 399aa    MW: 43463.6 Da    PI: 6.5118
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.42MZKgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.14.2e-055069221
                 HHHHHHHHHHHHHHHHHHHH CS
          HLH  2 rrahnerErrRRdriNsafe 21
                 r +h+  E+rRR++iN+++ 
  Araip.42MZK 50 RSKHSVTEQRRRSKINERYV 69
                 899**************985 PP

2HLH20.39.8e-071171491955
                  HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  19 afeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +f+ Lr+l+P++    ++K + a+ L +++eY+++Lq
  Araip.42MZK 117 RFQILRDLIPHS----DQKRDTASFLLEVIEYVQYLQ 149
                  69*********9....8*******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.37948148IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.5E-174966IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.72E-750153No hitNo description
Gene3DG3DSA:4.10.280.106.5E-17117170IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.41E-9117169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    Send to blast
MKGSRDAHEP SHMLSFLPLR LSISDLQLLC LVSGFVNADA KAVDKASVIR SKHSVTEQRR  60
RSKINERYVQ RASVISSVLS ASVFDVGALN HDASGCQAVN TVGIVICYED IGDLFFRFQI  120
LRDLIPHSDQ KRDTASFLLE VIEYVQYLQE KVQKYEGSYQ GWGHEPSKLM PWRNSHWRVQ  180
SFVGQPQAIK NGSGPVSPFP GKFDESNISI SPTMLSGNQN MIDTDQGRDI VSKASEGQTD  240
LASKGIALPL GMHPNMSVPV RSDGVLSHPL QGSVSEAQST ECPAASEPLS QQDELTIEGG  300
TISISSVYSQ GAVKNSNSYE YELLNNLTQA LQSAGLDLSQ ASISVQINLG KRANNGPSCG  360
TSSPKNHDMV PSSNQAFAQF RDAGSEDSDQ AQKRLKTFK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00219DAPTransfer from AT1G69010Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016202949.10.0PREDICTED: transcription factor BIM2
TrEMBLV7C5J21e-177V7C5J2_PHAVU; Uncharacterized protein
STRINGGLYMA02G13670.11e-173(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17303382
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.12e-92BES1-interacting Myc-like protein 2